Genetic Evaluation of Cardiomyopathy

Overview

Substantial progress has been made recently in understanding the genetic basis of cardiomyopathy. Cardiomyopathies with known genetic cause include hypertrophic (HCM), dilated (DCM), restrictive (RCM), arrhythmogenic right ventricular dysplasia/cardiomyopathy (ARVD/C) and left ventricular noncompaction (LVNC). HCM, DCM, and RCM have been recognized as distinct clinical entities for decades, while ARVD/C and LVNC are relative newcomers to the field. Hence the clinical and genetic knowledge for each cardiomyopathy varies, as do the recommendations and strength of evidence.

The evidence indicating that HCM has a genetic basis is extensive: HCM is now understood largely to be a genetic disease of contractile proteins, although less commonly, infiltrative etiologies may also be causative (Table 17.1). The evidence supporting a genetic basis for DCM, after other more common causes have been excluded (e.g., ischemic disease, hypothyroidism, cardiotoxic agents such as doxorubicin), is now substantial for familial dilated cardiomyopathy (FDC), where FDC is defined as DCM of unknown cause in two or more closely related family members (Table 17.2). However, whether sporadic DCM has a genetic basis remains an open question, especially when detectable familial disease has been clinically excluded by testing closely related family members. Thus, while some recommendations formulated for the genetic evaluation of cardiomyopathy, such as the need for family history, apply to all entities, other recommendations must be tailored to account for these differences. This is particularly relevant as these guidelines use the generic term 'cardiomyopathy' to imply possible familial or genetic cause, assuming that all other detectable causes of cardiomyopathy have been ruled out. As noted above, multiple non-genetic causes are possible for DCM.

Recent discoveries indicate that ARVD/C is largely caused by mutations in genes encoding proteins of the desmosome (Table 17.3). Although initially recognized predominantly in the right ventricle, left ventricular involvement in 20-40% of patients has prompted the change in nomenclature from ARVD to ARVD/C.1

Discovering the genetic basis of restrictive cardiomyopathy (RCM) has been more challenging, as RCM is much less common than DCM or HCM, and less commonly presents with familial disease (Table 17.3).

LVNC is an anatomic abnormality of left ventricular myocardial development: left ventricular compaction is incomplete, leaving deep trabeculations in the LV myocardium. LVNC was categorized as a specific type of cardiomyopathy by an expert panel in 20062, and some genetic association has been observed (Table 17.3). Although initially reported to be a rare condition associated with adverse outcome3, more recent reports 4-6 have called into question those preliminary conclusions.7 Three different echocardiographic criteria have been utilized for diagnosis.6 These authors suggested that the diagnostic criteria for LVNC might be too sensitive. Because of the uncertainty of diagnostic standards leading to difficulty clarifying its phenotype, we suggest that the LVNC recommendations be limited to those individuals with only the most prominent disease.

This section organizes recommendations by cardiac phenotype, recognizing that there is substantial overlap among phenotypes and some mutations are associated with more than one phenotype. Because therapeutic decision-making is generally dictated by phenotype, this approach was considered most helpful for the clinician.

The available clinical genetics data for each of the cardiomyopathies varies greatly in content and quality, and thus the quality and certainty of genetic counseling information is also variable. The evidence that supports clinical genetic testing varies greatly. While analytic validity (the ability of the test to detect a mutation) is attainable with current methods, evidence to support clinical validity (the ability of the test to detect the condition) remains quite limited for most cardiomyopathies, the exception being HCM. A separate measurement, clinical utility, defines the global risks and benefits of any test, asking the all-important question: how will the genetic information, whether positive or negative, affect clinical decision-making for the patient or the patient's family? Clinical utility remains to be defined for all genetic testing of cardiomyopathies.

While each recommendation has been designed for adult and pediatric patients, many of the references used to formulate these recommendations have focused primarily on adults. A section devoted to pediatric genetic cardiomyopathies provides additional specific information.

Despite these limitations, recent progress makes it possible to propose recommendations for the genetic evaluation of cardiomyopathy. These recommendations will evolve and mature as more robust clinical genetics knowledge becomes available.

Table 17.1: Genetic Causes of Hypertrophic Cardiomyopathy

Gene* Protein OMIM** frequency, familial*** frequency, sporadic** Comments Selected References
AUTOSOMAL Dominant HCM - genes encoding sarcomeric proteins
MYH7 β-myosin heavy chain 160760 30-40% 30-40% wide age range; severe LVH; heart failure, SCD 10, 11, 37, 38
MYBPC3 myosin-binding protein C 600958 30-40% 30-40% usually milder disease, although can be severe; some older onset 10, 11, 38, 39
TNNT2 cardiac troponin T 191045 10-20% 10-15% mild LVH; SCD more common 10, 11, 38,40
TPM α-tropomyosin 191010 2-5% ? 10, 11, 38, 39
TNNI3 cardiac troponin I 191044 2-5% ? 10, 11, 38, 41
MYL2 myosin regulatory light chain 160781 rare rare 42
MYL3 myosin essential light chain 160790 rare rare 42
ACTC cardiac actin 102540 rare rare 43
TTN titin 188840 rare rare 44
MYH6 α-myosin heavy chain 160710 rare rare 45
TCAP titin-cap or telethonin 604488 rare rare 46
HCM caused by metabolic/infiltrative disease
PRAGK2 AMP-activated protein kinase subunit 602743 ? ? HCM, with WPW 47
GLA α-galactosidase 300644 ? ? Fabry disease, X-linked 48
LAMP2 lysosome associated membrane protein 2 309060 ? ? Danon disease, X-linked 49

*Genes within each category are ordered by publication.
**OMIM is Online Mendelian Inheritance in Man (accessed via http://www.ncbi.nlm.nih.gov/sites/entrez?db=omim).
***Rare denotes a frequency usually < 1%.

Table 17.2: Genetic Causes of Dilated Cardiomyopathy

Gene* Protein OMIM Frequency, familial** Frequency, sporadic** Comments*** References
AUTOSOMAL Dominant FDC Dilated cardiomyopathy phenotype
ACTC cardiac actin 102540 rare rare 50-54
DES desmin 125660 ? ? 53, 55-57
LMNA lamin A/C 150330 7.3% 3.0% 5.5% overall (41/748, 6 studies, see text) 21-26, 58-64
SGCD δ-sarcoglycan 601411 rare rare 56, 65, 66
MYH7 β-myosin heavy chain 160760 6.3% 3.2% 4.8% overall (22/455, 3 studies) 19, 67-69
TNNT2 cardiac troponin T 191045 2.9% 1.6% 2.3% overall (15/644, 3 studies) 19, 67, 69-72
TPM1 α-tropomyosin 191010 rare rare 73
TTN titin 188840 ? ? 74
VCL metavinculin 193065 rare rare 69,75
MYBPC3 myosin-binding protein C 600958 ? ? 68
MLP/CSRP3 muscle LIM protein 600824 rare rare 19,76
ACTN2 α-actinin-2 102573 ? ? 77
PLN phospholamban 172405 rare rare 69, 78, 79
ZASP/LDB3 Cypher/LIM binding domain 3 605906 ? ? 19, 80
MYH6 α-myosin heavy chain 160710 ? ? 45
ABCC9 SUR2A 601439 81
TNNC1 cardiac troponin C 191040 ? ? 72
titin-cap TCAP titin-cap or telethonin 604488 rare rare 19, 46
SCN5A sodium channel 600163 ? ? 2.3% overall (11/469, 2 studies) 82-84
EYA4 eyes-absent 4 603550 ? ? 85
TMPO thymopoietin 188380 ? ? 86
PSEN1/PSEN2 presenilin 1/2 104311 ? ? 87
X-LINKED FDC
DMD dystrophin 300377 88, 89
TAZ/G4.5 tafazzin 300394 90, 91
AUTOSOMAL RECESSIVE FDC
TNNI3 cardiac troponin I 191044 ? ? 92

*Genes are ordered by publication year.
**Rare indicates less than 1%; frequencies are provided only with two or more publications.
***Overall frequencies may include studies that did not distinguish between familial and sporadic cases.

Table 17.3: Genetic Causes of Arrhythmogenic Right Ventricular Dysplasia/Cardiomyopathy, Left Ventricular Noncompaction, and Restrictive Cardiomyopathy

Gene Protein OMIM frequency* Comments Selected References
Arrythmogenic Right Ventricular Dysplasia/Cardiomyopathy
JUP plakoglobin 173325 rare Naxos disease, autosomal recessive 93-95
DSP desmoplakin 125647 6-16% 1,96
PKP2 plakophilin-2 602861 11-43% 1,97,98
DSG2 desmoglein-2 125671 12-40% 1,99,100
DSC2 desmocollin-2 125645 rare 1,101,102
RYR2 ryanodine receptor 180902 rare 103
TGFB3 transforming growth factor beta-3 190230 rare 96,104
Left Ventricular Noncompaction
MYH7 β-myosin heavy chain 160760 ? 106
LDB3 Limb domain binding protein 3 605906 ? 80
DTNA α-dystrobrevin 601239 ? 107
TAZ taffazzin 300394 ? 107
Restrictive Cardiomyopathy
MYH7 β-myosin heavy chain 160760 ? 106,108
TNNI3 troponin I 191044 ? 109

*frequency estimates for ARVD/C are from Genetests.